How to cite this paper
Krajewska, M., Szymczak-Żyła, M & Kowalewska, G. (2017). Carotenoid determination in recent marine sediments - practical problems during sample preparation and HPLC analysis.Current Chemistry Letters, 6(3), 91-104.
Refrences
1 Lohr M. (2011) Carotenoid metabolism in phytoplankton, in: Roy S., Llewellyn C. A., Skorstad Egeland E., and Johnson G.(Eds.) Phytoplankton Pigments. Cambridge University Press, New York, 113- 161.
2 Porra R. J., Pfündel E. E, and Engel N. (1997) Metabolism and function of photosynthetic pigments, in: Jeffrey S. W., Manoura R. F. C., and Wright S. W. (Eds.) Phytoplankton pigments in oceanography. SCOR-UNESCO Publishing, France, 85- 126. Jeffrey S. W., Mantoura R. F. C., and Bjørnland T. Data for the identification of 47 key phytoplankton pigments. ibid., 447- 559.; Wright S.W. High- resolution HPLC system for chlorophylls and carotenoids of marine phytoplankton. ibid., 327- 341.
3 Bianchi T. S., and Canuel E. (2011) Chemical Biomarkers in Aquatic Ecosystem. Princeton University Press, Princeton, New Yersey.
4 Leavitt P. R., and Hodgson D. A. (2001) Sedimentary pigments, in: Smol J. P., Birks H. J., and Last W. M. (Eds.) Tracking Environmental Change Using Lake Sediments. Kluwer Academic Publisher, Dordreht, 295- 325.
5 Chen N., Bianchi T. S., Mckee B. A., and Bland, J. M. (2001) Historical trends of hypoxia on the Louisiana shelf: application of pigments as biomarkers. Org. Geochem., 32 (4) 543- 561.
6 Mendes C. R., Cartaxana P., and Brotas V. (2007) HPLC determination of phytoplankton and microphytobenthos pigments: comparing resolution and sensitivity of a C18 and C8 method. Limnol. Oceanogr.- Meth., 5 (10) 363- 370.
7 Buffan- Dubau E., and Carman, K. R. (2000) Extraction of benthic microalgal pigments for HPLC analyses. Mar. Ecol.- Prog. Ser., 204 293- 297.
8 Louda J. W., Loitz J. W., Rudnick D. T., and Baker E. W. (2000) Early diagenetic alteration of chlorophyll-a and bacteriochlorophyll-a in a contemporaneous marl ecosystem; Florida Bay. Org. Geochem., 31 (12) 1561- 1580.
9 Szymczak- Żyła M., Louda J. W., and Kowalewska, G. (2008) Comparison of extraction and HPLC methods for marine sedimentary chloropigment determinations. J. Liq. Chromatogr. R. T., 31 (8) 1162- 1180.
10 Leruste A., Hatey E., Bec B., and De Wit R. (2015) Selecting an HPLC method chemotaxonomic analysis of phytoplankton community in Mediterranean coastal lagoons. Transitional Waters Bulletin, 9 (1) 20- 41.
11 Reuss N., and Conley, D.J. (2005) Effects of sediment storage conditions on pigment analyses. Limnol. Oceanogr- Meth., 3 (10) 477- 487.
12 Watanabe K., Park H. D., and Kumon F. (2012) Historical change of phytoplankton in a eutrophic lake in Japan as determined by analysis of photosynthetic pigments in a lakebed sediment core. Environ. Earth Sci., 66 (8) 2293- 2300.
13 Meyer K. M., Macalady J. M., Fulton J. M., Kump L. R., Schaperdoth I., and Freeman K. H. (2011) Carotenoid biomarkers as an imperfect reflection of the anoxygenic phototrophic community in meromictic Fayettevile Grren Lake. Geobiology, 9 (4) 321- 329.
14 Josefson A. B., Norkko J., and Norkko A. (2012) Burial and decomposition of plant pigments in Surface sediments of the Baltic Sea: role of oxygen and benthic fauna. Mar. Ecol.- Prog. Ser., 455 33- 49.
15 Deshpande B. N., Tremblay R., Pienitz R., and Vincent W. F. (2014) Sedimentary pigments as indicators of cyanobacterial dynamics in hypereutrophic lake. J. Paleolimnol., 52 (3) 171- 184.
16 MC Gowan S., Barker P., Haworth,E. Y., Leavitt P. R., Maberly S. C., and Pates J. (2012) Humans and climate as drivers of algal community change in Windermere since 1850. Freshwater Biol., 57 (2) 260- 277.
17 Freiberg R., Nõmm M., Tõnno I., Alliksaar T., Nõges T., and Kisand A. (2011) Dynamics of phytoplankton pigments in water and surface sediments of a large shallow lake. Est. J. Earth Sci., 60 (2) 91-101.
18 Tani Y., Matsumoto G. I., Soma M., Soma,Y., Hashimoto S., and Kawai T. (2009) Photosynthetic pigments in sediment core HDP- 04 from Lake Hovsgol, Mongolia, and their implication for changes in algal productivity and lake environment for the last 1 Ma. Quatern. Int., 205 (1-2) 74- 83.
19 Romero- Viana L., Keely B. J., Camacho A., Vicente E., and Rosa Miracle M. (2010) Primary production in Lake La Cruz (Spain) over the last four centuries: reconstruction based on sedimentary signal of photosynthetic pigments. J. Paleolimnol., 43 (4) 771- 786.
20 Leavitt P. R., Vinebrooke R. D., Donald D. B., Smol J. P., and Schindler, D. W. (1997) Past ultraviolet radiation environments in lakes derived from fossil pigments. Nature, 388 457- 459.
21 Bianchi T.S, Demetropoulos A., Hadjichristophorou M., Argyrou M., Baskaran M., and Lambert C. (1996) Plant Pigments as Biomarkers of Organic Matter Sources in Sediments and Coastal Waters of Cyprus (eastern Mediterranean). Estuar. Coast. Shelf S., 42 (1) 103- 115.
22 Bianchi T. S., Johansson B., and Elmgren R. (2000) Breakdown of phytoplankton pigments in Baltic sediments: effects of anoxia and loss of deposit-feeding macrofauna. J. Exp. Mar. Biol. Ecol., 251 (2) 161- 183.
23 Bianchi T. S., Johansson B., and Elmgren R. (2000) Breakdown of phytoplankton pigments in Baltic sediments: effects of anoxia and loss of deposit-feeding macrofauna. J. Exp. Mar. Biol. Ecol., 251 (2) 161-183.
24 Van Heukelem L., Lewitus A. J., Kana T. M., and Craft N. E. (1994) Improved separations of phytoplankton pigments using temperature- controlled high performance liquid chromatography. Mar. Ecol.- Prog. Ser., 114 303- 313.
25 Zapata M., Rodriguez F., and Garrido J. L. (2000) Separation of chlorophylls and carotenoids from marine phytoplankton: a new HPLC method using a reversed phase C8 column and pyridine- containing mobile phases. Mar. Ecol.- Prog. Ser., 195 29- 45.
26 Jun Z., Peng Y., Zhigang Y. U., and Bianchi T. S. (2011) Orthogonal design for optimization of pigment extraction from surface sediments of the Changjiang River Estuary. Acta Oceanol. Sin., 30 (4) 33- 42.
27 Hobbs W. O., Lalonde S. V., Vinebrooke R. D., Konhauser K. O., Weidman R. P., Graham M. D., and Wolfe A. P. (2010) Algal- silica cycling and pigment diagenesis in recent alpine lake sediments: mechanisms and paleoecological implications. J. Paleolimnol., 44 (2) 613- 628.
28 Hagerthey S. E., Louda J. W., and Mongkronsri P. (2006) Evaluation of pigment extraction methods and a recommended protocol for periphyton chlorophyll a determination and chemotaxonomic assessment. J. Phycol., 42 1125- 1136.
29 Brotas V., and Plante- Cuny M.-R. (2003) The use of HPLC pigment analysis to study microphytobenthos communities. Acta Oecol., 24 (1) 109- 115.
30 Szymczak- Żyła M. (2016) Analysis of chloropigments in marine sediments using accelerated extraction (ASE). Limnol. Oceanogra.- Meth., 14 (7) 477- 489.
31 Van Heukelem L., and Thomas, C. S. (2001) Computer- assisted high- performance liquid chromatography method development with applications to the isolation and analysis of phytoplankton pigments. J. Chromatogr. A, 910 31- 49.
32 Louda J. W., Liu L., and Baker E. W. (2002) Senescence- and death- related alteration of chlorophylls and carotenoids in marine phytoplankton. Org. Geochem., 33 (12) 1635- 1653.
33 Vidussi F., Claustre H., Bustillos- Guzman J., Cailliau C., and Marty J -C. (1996) Determination of chlorophylls and carotenoids of marine phytoplankton: separation of chlorophyll a from divinylchlorophyll a and zeaxanthin from lutein. J. Plankton. Res., 18 (12) 2377- 2382.
34 Szymczak-Żyła M., and Kowalewska G. (2007) Chloropigments a in the Gulf of Gdańsk (Baltic Sea) as markers of the state of this environment. Mar. Pollut. Bull., 55 (10-12) 512- 528.
35 Kowalewska G. (1997) Chlorophyll a and its derivatives in recent sediments of the southern Baltic Sea collected in the years 1992- 1996. Oceanologia, 39 (4) 413- 432.
2 Porra R. J., Pfündel E. E, and Engel N. (1997) Metabolism and function of photosynthetic pigments, in: Jeffrey S. W., Manoura R. F. C., and Wright S. W. (Eds.) Phytoplankton pigments in oceanography. SCOR-UNESCO Publishing, France, 85- 126. Jeffrey S. W., Mantoura R. F. C., and Bjørnland T. Data for the identification of 47 key phytoplankton pigments. ibid., 447- 559.; Wright S.W. High- resolution HPLC system for chlorophylls and carotenoids of marine phytoplankton. ibid., 327- 341.
3 Bianchi T. S., and Canuel E. (2011) Chemical Biomarkers in Aquatic Ecosystem. Princeton University Press, Princeton, New Yersey.
4 Leavitt P. R., and Hodgson D. A. (2001) Sedimentary pigments, in: Smol J. P., Birks H. J., and Last W. M. (Eds.) Tracking Environmental Change Using Lake Sediments. Kluwer Academic Publisher, Dordreht, 295- 325.
5 Chen N., Bianchi T. S., Mckee B. A., and Bland, J. M. (2001) Historical trends of hypoxia on the Louisiana shelf: application of pigments as biomarkers. Org. Geochem., 32 (4) 543- 561.
6 Mendes C. R., Cartaxana P., and Brotas V. (2007) HPLC determination of phytoplankton and microphytobenthos pigments: comparing resolution and sensitivity of a C18 and C8 method. Limnol. Oceanogr.- Meth., 5 (10) 363- 370.
7 Buffan- Dubau E., and Carman, K. R. (2000) Extraction of benthic microalgal pigments for HPLC analyses. Mar. Ecol.- Prog. Ser., 204 293- 297.
8 Louda J. W., Loitz J. W., Rudnick D. T., and Baker E. W. (2000) Early diagenetic alteration of chlorophyll-a and bacteriochlorophyll-a in a contemporaneous marl ecosystem; Florida Bay. Org. Geochem., 31 (12) 1561- 1580.
9 Szymczak- Żyła M., Louda J. W., and Kowalewska, G. (2008) Comparison of extraction and HPLC methods for marine sedimentary chloropigment determinations. J. Liq. Chromatogr. R. T., 31 (8) 1162- 1180.
10 Leruste A., Hatey E., Bec B., and De Wit R. (2015) Selecting an HPLC method chemotaxonomic analysis of phytoplankton community in Mediterranean coastal lagoons. Transitional Waters Bulletin, 9 (1) 20- 41.
11 Reuss N., and Conley, D.J. (2005) Effects of sediment storage conditions on pigment analyses. Limnol. Oceanogr- Meth., 3 (10) 477- 487.
12 Watanabe K., Park H. D., and Kumon F. (2012) Historical change of phytoplankton in a eutrophic lake in Japan as determined by analysis of photosynthetic pigments in a lakebed sediment core. Environ. Earth Sci., 66 (8) 2293- 2300.
13 Meyer K. M., Macalady J. M., Fulton J. M., Kump L. R., Schaperdoth I., and Freeman K. H. (2011) Carotenoid biomarkers as an imperfect reflection of the anoxygenic phototrophic community in meromictic Fayettevile Grren Lake. Geobiology, 9 (4) 321- 329.
14 Josefson A. B., Norkko J., and Norkko A. (2012) Burial and decomposition of plant pigments in Surface sediments of the Baltic Sea: role of oxygen and benthic fauna. Mar. Ecol.- Prog. Ser., 455 33- 49.
15 Deshpande B. N., Tremblay R., Pienitz R., and Vincent W. F. (2014) Sedimentary pigments as indicators of cyanobacterial dynamics in hypereutrophic lake. J. Paleolimnol., 52 (3) 171- 184.
16 MC Gowan S., Barker P., Haworth,E. Y., Leavitt P. R., Maberly S. C., and Pates J. (2012) Humans and climate as drivers of algal community change in Windermere since 1850. Freshwater Biol., 57 (2) 260- 277.
17 Freiberg R., Nõmm M., Tõnno I., Alliksaar T., Nõges T., and Kisand A. (2011) Dynamics of phytoplankton pigments in water and surface sediments of a large shallow lake. Est. J. Earth Sci., 60 (2) 91-101.
18 Tani Y., Matsumoto G. I., Soma M., Soma,Y., Hashimoto S., and Kawai T. (2009) Photosynthetic pigments in sediment core HDP- 04 from Lake Hovsgol, Mongolia, and their implication for changes in algal productivity and lake environment for the last 1 Ma. Quatern. Int., 205 (1-2) 74- 83.
19 Romero- Viana L., Keely B. J., Camacho A., Vicente E., and Rosa Miracle M. (2010) Primary production in Lake La Cruz (Spain) over the last four centuries: reconstruction based on sedimentary signal of photosynthetic pigments. J. Paleolimnol., 43 (4) 771- 786.
20 Leavitt P. R., Vinebrooke R. D., Donald D. B., Smol J. P., and Schindler, D. W. (1997) Past ultraviolet radiation environments in lakes derived from fossil pigments. Nature, 388 457- 459.
21 Bianchi T.S, Demetropoulos A., Hadjichristophorou M., Argyrou M., Baskaran M., and Lambert C. (1996) Plant Pigments as Biomarkers of Organic Matter Sources in Sediments and Coastal Waters of Cyprus (eastern Mediterranean). Estuar. Coast. Shelf S., 42 (1) 103- 115.
22 Bianchi T. S., Johansson B., and Elmgren R. (2000) Breakdown of phytoplankton pigments in Baltic sediments: effects of anoxia and loss of deposit-feeding macrofauna. J. Exp. Mar. Biol. Ecol., 251 (2) 161- 183.
23 Bianchi T. S., Johansson B., and Elmgren R. (2000) Breakdown of phytoplankton pigments in Baltic sediments: effects of anoxia and loss of deposit-feeding macrofauna. J. Exp. Mar. Biol. Ecol., 251 (2) 161-183.
24 Van Heukelem L., Lewitus A. J., Kana T. M., and Craft N. E. (1994) Improved separations of phytoplankton pigments using temperature- controlled high performance liquid chromatography. Mar. Ecol.- Prog. Ser., 114 303- 313.
25 Zapata M., Rodriguez F., and Garrido J. L. (2000) Separation of chlorophylls and carotenoids from marine phytoplankton: a new HPLC method using a reversed phase C8 column and pyridine- containing mobile phases. Mar. Ecol.- Prog. Ser., 195 29- 45.
26 Jun Z., Peng Y., Zhigang Y. U., and Bianchi T. S. (2011) Orthogonal design for optimization of pigment extraction from surface sediments of the Changjiang River Estuary. Acta Oceanol. Sin., 30 (4) 33- 42.
27 Hobbs W. O., Lalonde S. V., Vinebrooke R. D., Konhauser K. O., Weidman R. P., Graham M. D., and Wolfe A. P. (2010) Algal- silica cycling and pigment diagenesis in recent alpine lake sediments: mechanisms and paleoecological implications. J. Paleolimnol., 44 (2) 613- 628.
28 Hagerthey S. E., Louda J. W., and Mongkronsri P. (2006) Evaluation of pigment extraction methods and a recommended protocol for periphyton chlorophyll a determination and chemotaxonomic assessment. J. Phycol., 42 1125- 1136.
29 Brotas V., and Plante- Cuny M.-R. (2003) The use of HPLC pigment analysis to study microphytobenthos communities. Acta Oecol., 24 (1) 109- 115.
30 Szymczak- Żyła M. (2016) Analysis of chloropigments in marine sediments using accelerated extraction (ASE). Limnol. Oceanogra.- Meth., 14 (7) 477- 489.
31 Van Heukelem L., and Thomas, C. S. (2001) Computer- assisted high- performance liquid chromatography method development with applications to the isolation and analysis of phytoplankton pigments. J. Chromatogr. A, 910 31- 49.
32 Louda J. W., Liu L., and Baker E. W. (2002) Senescence- and death- related alteration of chlorophylls and carotenoids in marine phytoplankton. Org. Geochem., 33 (12) 1635- 1653.
33 Vidussi F., Claustre H., Bustillos- Guzman J., Cailliau C., and Marty J -C. (1996) Determination of chlorophylls and carotenoids of marine phytoplankton: separation of chlorophyll a from divinylchlorophyll a and zeaxanthin from lutein. J. Plankton. Res., 18 (12) 2377- 2382.
34 Szymczak-Żyła M., and Kowalewska G. (2007) Chloropigments a in the Gulf of Gdańsk (Baltic Sea) as markers of the state of this environment. Mar. Pollut. Bull., 55 (10-12) 512- 528.
35 Kowalewska G. (1997) Chlorophyll a and its derivatives in recent sediments of the southern Baltic Sea collected in the years 1992- 1996. Oceanologia, 39 (4) 413- 432.